tr_reliability() estimates the reliability of an anchor or transition
rating item using confirmatory factor analysis. The reliability estimate is
the R-squared value of the anchor item from the fitted CFA model.
Usage
tr_reliability(
data,
model = NULL,
anchor = NULL,
xsec = FALSE,
pair_by = c("position", "suffix"),
t1_suffix = NULL,
t2_suffix = NULL,
factor_names = NULL,
item_type = NULL,
continuous_items = NULL,
modification = TRUE,
mi_cut = 0.3,
complete_cases = TRUE,
print_model = TRUE,
verbose = TRUE,
...
)Arguments
- data
A data frame containing items and an anchor variable.
- model
Optional lavaan model syntax. If
NULL, syntax is generated automatically usingtr_reliability_model().- anchor
Character. Name of the anchor variable. If
NULL, the final column ofdatais treated as the anchor.- xsec
Logical. If
TRUE, estimate cross-sectional anchor reliability. IfFALSE, estimate longitudinal anchor / transition-rating reliability.- pair_by
Pairing method for longitudinal data.
"position"assumes Time 1 items followed by Time 2 items."suffix"detects pairs usingt1_suffixandt2_suffix.- t1_suffix
Regex suffix identifying Time 1 items when
pair_by = "suffix".- t2_suffix
Regex suffix identifying Time 2 items when
pair_by = "suffix".- factor_names
Optional character vector of factor name(s). If
NULL, defaults to"F1"whenxsec = TRUE, andc("F1", "F2")whenxsec = FALSE.- item_type
Optional character. Type of items used as indicators. If
NULL, defaults to"ordinal"unlesscontinuous_itemsis supplied, in which case it defaults to"mixed"."ordinal"treats all items and the anchor as ordered categorical variables."continuous"treats all items as continuous while still treating the anchor as ordered."mixed"treats all items as ordered except those listed incontinuous_items; the anchor is always treated as ordered.- continuous_items
Optional character vector of item names to treat as continuous. If supplied and
item_type = NULL,item_typeis automatically set to"mixed". Do not include the anchor variable; it is always treated as ordered.- modification
Logical. If
TRUE, return modification indices withsepc.lv > mi_cut.- mi_cut
Numeric. Cutoff for standardized latent-variable modification indices.
- complete_cases
Logical. If
TRUE, retain only complete cases before fitting the model.- print_model
Logical. If
TRUE, print the generated lavaan syntax.- verbose
Logical. If
TRUE, print progress messages.- ...
Additional arguments passed to
lavaan::cfa().
Details
This function follows the CFA approach for estimating transition-rating reliability described by Griffiths et al. (2022). For longitudinal data, Time 1 items load on the first factor, Time 2 items load on the second factor, and the anchor loads on both factors. Residuals of corresponding items across time-points are allowed to correlate. No constraints are placed on loadings or thresholds.
For cross-sectional data, a one-factor CFA model is used, with the anchor item included as an indicator of the latent factor.
References
Griffiths P, Terluin B, Trigg A, Schuller W, Bjorner JB. A confirmatory factor analysis approach was found to accurately estimate the reliability of transition ratings. J Clin Epidemiol. 2022;141:36-45. doi:10.1016/j.jclinepi.2021.08.029
Examples
set.seed(123)
sim <- simdat(N = 300)
dat <- sim$datw
rel <- tr_reliability(
data = dat[, c(sim$item_names$t1_items,
sim$item_names$t2_items,
"trat")],
anchor = "trat",
xsec = FALSE,
pair_by = "suffix",
t1_suffix = "",
t2_suffix = "\\.1",
item_type = "ordinal",
modification = FALSE,
print_model = FALSE
)
rel
#> Longitudinal anchor / transition-rating reliability
#> ---------------------------------------------
#> Anchor variable: trat
#> Item type: ordinal
#> Reliability R-squared: 0.6998
